通信学报 ›› 2013, Vol. 34 ›› Issue (5): 152-167.doi: 10.3969/j.issn.1000-436x.2013.05.018
黎作鹏1,2,张菁1,蔡绍滨1,王勇1,倪军2,3
出版日期:
2013-05-25
发布日期:
2017-06-27
基金资助:
Zuo-peng LI1,2,Jing ZHANG1,Shao-bin CAI1,Yong WANG1,Jun NI2,3
Online:
2013-05-25
Published:
2017-06-27
Supported by:
摘要:
摘要:基于生物启发的分子通信是一种以生物化学分子作为信息载体、用于互联纳米机器以组成分布式纳米网络的通信技术。归纳了分子通信的定义和特性,以及基于分子通信纳米网络的应用领域和国内外相关领域的重要科研活动与项目;介绍了分子通信的系统结构,其中重点描述了信息分子的传输机制;分别从系统的设计与实现、理论研究和基于分子通信的纳米网络技术3个方向总结和分析了分子通信的研究与发展现状,并展望了未来的研究方向。
黎作鹏,张菁,蔡绍滨,王勇,倪军. 分子通信研究综述[J]. 通信学报, 2013, 34(5): 152-167.
Zuo-peng LI,Jing ZHANG,Shao-bin CAI,Yong WANG,Jun NI. Review on molecular communication[J]. Journal on Communications, 2013, 34(5): 152-167.
表2
分子通信领域的主要国际会议"
会议名称 | 时间 | 地点 |
7th International Conference on Body Area Networks | 2012 | 奥斯陆(挪威) |
2nd IEEE International Workshop on Molecular and Nano-Scale Communications | 2012 | 渥太华(加拿大) |
1st IEEE International Workshop on Molecular and Nano-Scale Communications | 2011 | 上海(中国) |
International ICST Conference on Nano-Networks | 2011 | 亚特兰大(美国) |
Workshop on Nano,Molecular,and Quantum Communications at IEEE ICCCN'09 | 2009 | 旧金山(美国) |
NSF Workshop on Molecular Communication/Biological Communications Technology | 2008 | 阿灵顿(美国) |
2nd Workshop on Computing and Communications from Biological Systems at BIONETICS | 2008 | 兵库县(日本) |
1st Workshop on Computing and Communications from Biological Systems at BIONETICS | 2007 | 布达佩斯(匈牙利) |
International Symposium on Molecular Communication Technology | 2006 | 大阪(日本) |
Workshop on Molecular Communication | 2005 | 兵库县(日本) |
表3
分子通信领域的重要科研项目"
项目名称 | 支持与资助 | 研究内容 | 网址 |
Molecular Communication | DARPA;NSF;NICT | 信息分子传输及处理机制 | http://netresearch.ics.uci.edu/mc/ |
Molecular Nano-Communication Networks | NSF | 分子/纳米尺度信息论与纳米网络协议 | http://www.ece.gatech.edu/research/labs/bwn/monaco/ |
Molecular Communication and Networking Research | MEXT;Microsoft Research | 分子通信系统设计与纳米网络技术 | http://www.wakate.frc.eng.osaka-u.ac.jp/tnakano/ |
Nano Communication Networks | NSF | 分子信道模型与通信协议 | http://www.ece.gatech.edu/research/labs/bwn/nanos/ |
Nano-Networking | NSF | 分子通信系统及仿真工具 | http://www.n3cat.upc.edu/index |
Molecular Communication for Particulate Drug Delivery System | Samsung SAITGRO | 信息分子传输机制 | http://www.ece.gatech.edu/research/labs/bwn/actionpotential/ |
Nano-Scale and Quantum Communica-tions | IBM Faculty Award;TUBA-GEBIP | 系统设计、信道建模及分子信息论 | http://home.ku.edu.tr/~nwcl/nanoquantum.html |
[1] | AKYILDIZ I F , BRUNETT F , BLAZQUEZ C . Basic Principles of Finite Element Method and Numerical Method[J]. Computer Networks Journal, 2008,52(12):2260-2279. |
[2] | BUSH S F . Nanoscale Communication Networks[M]. Boston: Artech House Press, 2010. |
[3] | PIEROBON M , AKYILDIZ I F . A physical end-to-end model for molecular communication in nanonetworks[J]. IEEE Journal on Se-lected Areas in Communications, 2010,28(4):602-611. |
[4] | GREGORI M . A new nanonetwork architecture using flagellated bacteria and catalytic nanomotors[J]. IEEE Journal on Selected Areas in Com-munications, 2010,28(4):612-619. |
[5] | ATAKAN B , AKAN O , BALASUBRAMANIAM S . Body area nanonet-works with molecular communications in nanomedicine[J]. IEEE Commu-nications Magazine, 2012,50(1):28-34. |
[6] | AKYILDIZ I F , JORNET J M . The Internet of nano-things[J]. Wire-less Communications, 2010,17(6):58-63. |
[7] | LIU J Q . Molecular informatics of nano-communication based on cells:a brief survey[J]. Nano Communication Networks, 2010,1(11):118-125. |
[8] | DERYA M . Molecular communication nanonetworks inside human body[J]. Nano Communication Networks, 2012,3(1):19-35. |
[9] | FALKO D , OZGUR B A . A survey on bio-inspired networking[J]. Com-puter Networks, 2010,54(6):881-900. |
[10] | NAKANO T . Biologically inspired network systems: a review and future prospects[J]. IEEE Transactions on Systems,Man,and Cybernet-ics, 2011,41(5):630-643. |
[11] | SATOSHI H , YUKI M . Molecular communication:harnessing bio-chemical materials to engineer biomimetic communication systems[J]. Nano Communication Networks, 2010,1(1):20-30 |
[12] | NAKANO T , MOORE M J , WEI F . Molecular communication and networking: opportunities and challenges[J]. IEEE Transactions on Nanobioscience, 2011,11(2):135-148. |
[13] | NAKANO T , MOORE M J . Molecular Communication Technology as a Biological ICT[M]. Berlin: Springer, 2011. |
[14] | 周并举, 刘小娟, 詹杰 . 双光子通道中任意初态原子比特周期量子回声的调控[J]. 通信学报, 2012,33(3):177-182. |
[15] | ALFANO G . On information transmission among nanomachines[A]. Proc of Nano-Nets 06[C].Lausanne,Switzerland, 2006. 1-5. |
[16] | JALIL M A . Molecular transporter generation for quantum-molecular transmission via an optical transmission line[J]. Nano Communication Networks, 2010,1(2):96-101. |
[17] | HIYAMAM S . Molecular communication[A]. Proc of NSTI Nanotechnol-ogy Conference[C]. Boston,USA, 2005. 391-394. |
[18] | NAKANO T . Molecular communication paradigm overview[J]. Next Generation Information Technology, 2011,2(1):9-16. |
[19] | NAKANO T , SUDA T , KOUJIN T , et al . Molecular communication through gap junction channels[J]. Transactions on Computational Sys-tems Biology X, 2008,54(10):81-99. |
[20] | NAKANO T . Molecular communication through gap junction channels:system design,experiments and modeling[A].Proc of 2nd BIONET-ICS[C]. Budapest,Hungary, 2007. 139-146. |
[21] | YASIR M , ANJUM M . Molecular communication for nanoscale communication networks[A]. Proc of the 8th International Conference on Frontiers of Information Technology[C]. slama-bad,Pakistan, 2010. 213-217. |
[22] | MORITANI Y . Molecular communication for health care applica-tions[A]. Proc of PERCOM 06[[C]. Pisa,Italy, 2006. 549-553. |
[23] | SUDA T . Exploratory research on molecular communication between nanomachines[A]. Proc of Genetic and Evolutionary Computation Conference[C]. Washington DC,USA, 2005. 27-31. |
[24] | NAKANO T . NSF Workshop on Molecular Communication/Bi-ological Communications Technology[R]. NSF Report, 2008. |
[25] | SASAKI Y , SHIOYAMA Y . A nanosensory device fabricated on a liposome for detection of chemical signals[J]. Biotechnology and Bioengineering, 2010,105(1):37-43. |
[26] | NAKANO T . Information transfer through calcium signaling[A]. Proc of Nano-Net'09[C]. Lucerne,Switzerland, 2009. 29-33. |
[27] | GINE L P , AKYILDIZ I F . Molecular communication options for long range Nanonetworks[J]. Elsevier Computer Networks, 2009,53(16):2753-2766. |
[28] | MOORE M J , ENOMOTO A . A design of a molecular communication system for nanomachines using molecular motors[A]. Proc of PER-COM 06[C]. Pisa,Italy, 2006. 554-559. |
[29] | ENOMOTO A , MOORE M J , SUDA T , et al . Design of self-organ-izing microtubule networks for molecular communication[J]. Nano Communication Networks, 2011,2(1):16-24. |
[30] | ENOMOTO A . A molecular communication system using a network of cytoskeletal filaments[A]. Proc of 9th Nanotechnology Conference and Trade Show[C]. Boston,USA, 2006. 725-728. |
[31] | GAO Y L , LAKSHMANAN S , SIVALUMAR R . On attractant sched-uling in networks based on bacterial communication[A]. Proc of 1st IEEE MoNaCom[C]. Shanghai,China, 2011. 419-424. |
[32] | MORITANI Y , HIYAMA S , NOMURA S M , et al . A communication interface using vesicles embedded with channel forming proteins in molecular communication[A]. Proc of BIONETICS'07[C]. Budapest,Hungary, 2007. 147-149. |
[33] | HIYAMA S . A biochemically-engineered molecular communication system[A]. NanoNet'08[C]. Boston,USA, 2009. 85-94. |
[34] | SHANNON C E . A mathematical theory of communication[J]. Bell System Technical Journal, 1948,27(3):379-423. |
[35] | UPAL M . Characterization of intersymbol interference in concentra-tion coded unicast molecular communication[A]. Proc of CCECE'11[C]. Ontario,Canada, 2011. 164-168. |
[36] | AKYILDIZ I F . Propagation models for nano communication net-works[A]. Proc of 4th EuCAP[C]. Barcelona,Spain, 2010. 1-5. |
[37] | EKFORD A W . Microchannel molecular communication with nano-scale carriers: brownian motion versus active transport[A]. Proc of ICN-B'10[C]. Hong Kong,China, 2010. 854-858. |
[38] | THOMAS P J . The diffusion mediated biochemical signal relay chan-nel[A]. Proc of NIPS'03[C]. Vancouver,Canada, 2003. 1-8. |
[39] | MOOREM J , ENOMOTOA . Molecular communication: unicast commu-nication on a microtubule topology[A]. IEEE International Conference on SMC'08[C].Singapore, 2008. 18-23. |
[40] | BERRIDGE M J . The AM and FM of calcium signaling[J]. Na-ture, 1997,386(6627):759-760. |
[41] | VERKHRATSKY A . Calcium signaling in glial cells[J]. Trends in Neurosciences, 1996,19(8):205-212. |
[42] | COBO L C . Bacteria-based communication in nanonetworks[J]. Nano Communication Networks, 2010,1(4):244-256. |
[43] | BALASUBRAM S , NOREENO T . Development of artificial neuronal networks for molecular communication[J]. Nano Communication Net-works, 2012,2(2):150-160. |
[44] | GUNEY A , ATAKAN B . Mobile ad hoc nanonetworks with collision based molecular communication[J]. IEEE Transactions on Mobile Com-puting, 2011,11(3):353-366. |
[45] | YOSHIKAZU H . Growth of suspended carbon nanotube networks on 100-nm-scalesilicon pillars[J]. Applied Physics Letter, 2002,81(12):2261-2263. |
[46] | SIAVASH G , FARSHAD L , ALI M . Carbon modeling and analysis of abnormality detectoin in biomolecular nano-networks[J]. Nano Com-munication Networks, 2012,3(4):229-241. |
[47] | BIANCO A . Applications of carbon nanotubes in drug deliver[J]. Current Opinion in Chemical Biology, 2005,9(6):674-679. |
[48] | WEISS R . Synthetic biology: from bacteria to stem cells[A]. Design Automation Conference[C]. San Diego,USA, 2007. 634-635. |
[49] | RON W , SUBHAYU B . Genetic circuit building blocks for cellular computation,communications,and signal processing[J]. Natural Comput-ing, 2003,2(1):47-84. |
[50] | WALSH F , BALASUBRAMANIAM S . Hybrid DNA and enzymatic based computation for address encoding,link switching and error cor-rection in molecular communication[A]. Proc of 3rd Nano-Net[C]. Boston,USA, 2008. 28-38. |
[51] | BENENSON Y . An autonomous molecular computer for logical control of gene expression[J]. Nature, 2004,429(6990):423-429. |
[52] | STETTER M , SCHURMANN B . Logical nanocomputation in enzyme reaction networks[A]. Proc of 1st BIONETICS[C]. Lugano,Switzer-land, 2006. 1-7. |
[53] | FRANK W , BALASUBRAM S . Synthetic protocols for nano sensor transmitting platforms using enzyme and DNA based computing[J]. Nano Communication Networks, 2010,1(1):50-62. |
[54] | DOKTYCZ M J , SIMPSON M L . Nano-enabled synthetic boilogy[J]. Molecular Systems Biologyy, 2007,3(125):1-10. |
[2] | MUKAI M , MARUO K . Propagation and amplification of molecular information using a photo-responsive molecular switch[J]. Super Mo-lecular Chemistrycy, 2009,21(3):284-291. |
[56] | HIYAMA S , ISOGAWA Y , SUDA T , et al . A design of an autonomous molecule loading/transporting/unloading system using DNA hybridi-zation and bio-molecular linear motors[A]. Proc of ENS' 05[C]. Paris,France, 2005. 1-6. |
[57] | HIRATSUKA Y , TADA T . Controlling the direction of kinesindriven microtubule movements along micro lithographic tracks[J]. Biophysi-cal Journal, 2001,81(3):1555-1561. |
[58] | FARSAD N . Quick system design of vesicle based active transport molecular communication by using a simple transport model[J]. Nano Communication Networks, 2010,2(4):175-188. |
[59] | NAKANO T . Repeater design and modeling for networks[A]. Proc of 1st IEEE MoNaCom[C]. Shanghai,China, 2011. 501-506. |
[60] | ARIFLER D . Link layer modeling of bio-inspired communication in nanonetworks[J]. Nano Communication Networks, 2011,2(4):223-229. |
[61] | ABADAL S , AKYILDIZ I F . Automata modeling of quorum sensing for nano communication networks[J]. Nano Communication Networks, 2011,2(1):74-83. |
[62] | KOTSAVASILOGLOU C . Modeling signal transmission and robust-ness in biological neural networks[A].Proc of MABE'08[C]. Acapulco,Mexio, 2008. 80-85. |
[63] | ATAKAN B , GALMES S , AKAN B O B . Nanoscale communication with molecular arrays in nanonetworks[J]. IEEE Transactions on Nano-bioscience, 2012,11(2):149-160. |
[64] | MOHAMMAD U M . On the characterization of binary concentra-tion-encoded molecular communication in nanonetworks[J]. Nano Communication Networks, 2010,1(4):289-300. |
[65] | MOORE M J , SUDA T , OIWA K . Molecular communication: model-ing noise effects on information rate[J]. IEEE Transaction Nanobio-science, 2009,8(2):169-180. |
[66] | KURAN M S , YILMAZ H B . Interference effects over modulation techniques in communication via diffusion systemc Nano Commu-nications Networks, 2012,3(1):65-73. |
[67] | ATAKAN B , AKAN O B . An information theoretical approach for molecular communication[A]. IProc of BIONETICS'07[C]. Budapest,Hungary, 2007. 33-40. |
[68] | CHOU C T . Molecular circuits for decoding frequency coded signals in nano-communication networks[J]. Nano Communications Networks, 2011,3(1):46-56. |
[69] | MASSIMILIANO P , AYILDIZ I F . AYILDIZ I F.Diffusion-based noise analysis for molecular communication in nanonetworks[J]. IEEE Transactions on Signal Processing, 2011,59(6):2532-2547. |
[70] | MASSIMILIANO P . Noise analysis in ligand-binding reception for molecular communication in Nanonetworks[J]. IEEE Transactions on Signal Processing, 2011,59(9):4168-4182. |
[71] | SRINIVAS K V , ADVE R S . Molecular communication in fluid media:the additive inverse gaussian noise channel[J]. IEEE Transactions on Information Theory, 2010,58(7):4678-4692. |
[72] | KADLLOR S , ADVE R S , ECKFORD A W . Molecular communica-tion using brownian motion with drift[J]. IIEEE Transactions on Nano-Biosciencey, 2011,11(2):89-99. |
[73] | ECKFORD A W . Nanoscale communication with brownianmotion[A]. Proc of CISS 07[C]. Baltimore,USA, 2007. 160-165. |
[74] | GREGORI M , LLASTER I . Physical channel characterization for me-dium-range nano-networks using flagellated bacteria[J]. Journal of Com-puter Networks, 2011,55(3):102-107. |
[75] | WALSH F , BALASUBRAM S . Review of communication mecha-nisms for biological nano and MEMS devices[A]. Proc of Bionet-ics'07[C]. Budapest,Hungary, 2007. 307-312. |
[76] | GARRALDA N , LLATSER J , CABELLOS A , et al . Diffusion based physical channel identification in molecular nanonetworks[J]. Nano Communication Networks, 2011,2(4):196-204. |
[77] | GREGORI M , LLATSER J . Physical channel characterization for medium-range nanonetworks using catalytic nanomotors[J]. Nano Communication Networks, 2010,1(2):102-107. |
[78] | NAKANO T , LIU J Q . Design and analysis of molecular relay channels: an information theoretic approach[J]. IEEE Transactions on Nanobioscience, 2010,9(3):213-221. |
[79] | KADLLOR S . A framework to study the molecular communication system[A]. Proc of ICCCN' 09[C]. San Francisco,USA, 2009. 1-6. |
[80] | FARSAD N , ECKFORD A W . A simple mathematical model for infor-mation rate of active transport molecular communication[A]. Proc of 1st MoNaCom[C]. Shanghai,China, 2011. 473-478. |
[81] | FARSAD N , ECKFORD A W . Information rates of active propagation in microchannel molecular communication[A]. Proc of 5th ICST[C]. Boston,USA, 2010. 16-21. |
[82] | ECKFORD A W . Timing Information Rates for Active Transport-Molecular Communicatio[R]. Nano Network Report, 2009. |
[2] | GALLUCCIO L , PALAZZO S . odeling signal propagation in nano-machine-to-neuron communications[J]. Nano Communication Networks, 2011,2(4):213-222. |
[84] | KURAN M S , YILMAZ H B , TUGCU T , et al . Energy model for communication via diffusion in nanonetworks[J]. Nano Communication Networks, 2010,1(2):86-95. |
[85] | DOGU A . Capacity analysis of a diffusion-based short-range molecu-lar nanocommunication channel[J]. Computer Networks, 2011,55(6):1426-1434. |
[86] | KARIG D K , SIUTI P , DAR R , et al . Model for biological communi-cation in a nano-fabricated cell-mimic driven by stochastic reso-nance[J]. Nano Communication Network, 2011,2(1):39-49. |
[87] | ECKFORD A W . Achievable information rates for molecular commu-nication with distinct molecules[A]. Proc of BIONETIC-S'07[C]. Bu-dapest,Hungry, 2007. 313-315. |
[88] | ATAKAN B , AKAN O B . On molecular multiple-access,broadcast,and relay channels in nanonetworks[A]. Proc of BIONET-ICS'08[C]. Brussels,Belgium, 2008. 67-74. |
[89] | ATAKAN B , AKAN O B . Deterministic capacity of information flow in molecular nanonetworks[J]. Nano Communication networks, 2010,1(1):31-42. |
[90] | PIEROBON M , AKYILDIZ I F . Information capacity of diffusionbased molecular communication in nanonetworks[A]. Proc of 1st INFOCOM[C]. Shanghai,China, 2011. 506-510. |
[91] | ECKFORD A W . Molecular communication: physically realistic mod els and achievable information rates[J]. IEEE Transactions on Info mation Theory, 2008,54(12):460-487. |
[92] | MIORANDI D . A stochastic model for molecular communications[J]. Nano Communication Networks, 2011,2(4):205-212. |
[93] | ATAKAN B , AKAN O B . On channel capacity and error compensa-tion in molecular communication[J]. Transactions on Computational System Biology X, 2008,54(10):59-80. |
[94] | 马祖长, 孙怡宁, 梅涛 . 无线传感器网络综述[J]. 通信学报, 2004,25(4):114-124. |
[95] | AKYILDIZ I F . Electromagnetic wireless nanosensor networks[J]. Nano Communication Networks, 2010,1(1):3-19. |
[96] | BUSH S F . Toward in vivo nanoscale communication networks: util-izing an active network architecture[J]. Frontiers of Computer Science in China, 2011,5(3):316-326. |
[97] | KOKSAL C E . Design and analysis of systems based on RF receivers with multiple carbon nanotube antennas[J]. Nano Communication Networks, 2010,1(3):160-172. |
[98] | HIYAMA S . Micropatterning of different kinds of biomaterialsas a platform of a molecular communication system[A]. PProc of 1st IEEE MoNaCom[C]. Shanghai,China, 2011. 479-484. |
[99] | MOORE M J , NAKANO T . Addressing by beacon distances using molecular communication[J]. Nano Communication Networks, 2011,1(2):161-173. |
[100] | NAKANO T . In-sequence molecule delivery over an aqueous me-dium[J]. Nano Communication Networks, 2010,1(3):181-188. |
[101] | PIETRO L , SATISHARAN B . Opportunistic routing through conju-gation in bacteria communication nanonetwork[J]. Nano Communi-cation Networks, 2011,3(1):19-35. |
[102] | CAKIR A R , OKTUG S . A nanonetwork environment with messag-ing and humoral immunity-based database implementation[J]. Nano Communication Networks, 2011,4(2):189-198. |
[103] | MORE M J , NAKANO T . Measuring distance from single spike feedback signals in molecular communication[J]. IEEE Transactions on Signal Processing, 2012,60(7):3576-3587. |
[104] | MORE M J , NAKANO T . Measuring distance with molecular com-munication feedback protocols[A]. Procof 5th BIONETIC-S[C]. Bos-ton,USA, 2010. 1-13. |
[105] | GUL E , ATAKAN B , AKAN O . Nanons: a nanoscale network simulator framework for molecular communications[J]. Nano Com-munication Networks, 2010,1(2):138-156. |
[106] | LLATSER I , PASCUAL I , GARRALDA N , et al . N3Sim: A Simula-tion Framework for Diffusion-Based Molecular Communication[R]. IEEE Technical Committee on Simulation Report, 2011. |
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