[1] |
CNCB-NGDC Members and Partners Database resources of the National Genomics Data Center,China National Center for Bioinformation in 2022[J]. Nucleic Acids Research, 2021.
|
[2] |
CHEN T T , CHEN X , ZHANG S S ,et al. The genome sequence archive family:toward explosive data growth and diverse data types[J]. Genomics,Proteomics &Bioinformatics, 2021.
|
[3] |
WANG Y Q , SONG F H , ZHU J W ,et al. GSA:genome sequence archive[J]. Genomics,Proteomics & Bioinformatics, 2017,15(1): 14-18.
|
[4] |
张思思, 陈旭, 陈婷婷 ,等. GSA-Human:人类遗传资源数据管理的公共系统[J]. 遗传, 2021(10): 988-993.
|
|
ZHANG S S , CHEN X , CHEN T T ,et al. GSA-Human:genome sequence archive for human[J]. Hereditas (Beijing), 2021(10): 988-993.
|
[5] |
CHEN M L , MA Y K , WU S ,et al. Genome warehouse:a public repository housing genome-scale data[J]. Genomics,Proteomics & Bioinformatics, 2021.
|
[6] |
LI C P , TIAN D M , TANG B X ,et al. Genome variation map:a worldwide collection of genome variations across multiple species[J]. Nucleic Acids Research, 2020,49(D1): 1186-1191.
|
[7] |
SONG S H , TIAN D M , LI C P ,et al. Genome variation map:a data repository of genome variations in BIG Data Center[J]. Nucleic Acids Research, 2018,46(D1): 944-949.
|
[8] |
ZHANG Y S , ZOU D , ZHU T T ,et al. Gene expression nebulas (GEN):a comprehensive data portal integrating transcriptomic profiles across multiple species at both bulk and single-cell levels[J]. Nucleic Acids Research, 2021.
|
[9] |
ZOU D , SUN S X , LI R J ,et al. MethBank:a database integrating next-generation sequencing single-base-resolution DNA methylation programming data[J]. Nucleic Acids Research, 2014,43(D1): 54-58.
|
[10] |
LI R J , LIANG F , LI M W ,et al. MethBank 3.0:a database of DNA methylomes across a variety of species[J]. Nucleic Acids Research, 2017,46(D1): 288-295.
|
[11] |
SANG J , ZOU D , WANG Z N ,et al. IC4R2.0:rice genome reannotation using massive RNA-seq data[J]. Genomics,Proteomics & Bioinformatics, 2020,18(2): 161-172.
|
[12] |
TANG B X , ZHOU Q , DONG L L ,et al. iDog:an integrated resource for domestic dogs and wild canids[J]. Nucleic Acids Research, 2018,47(D1): 793-800.
|
[13] |
WANG Z H , ZHU Q H , LI X ,et al. iSheep:an integrated resource for sheep genome,variant and phenotype[J]. Frontiers in Genetics, 2021,12: 714852.
|
[14] |
SONG S H , MA L N , ZOU D ,et al. The global landscape of SARS-CoV-2 genomes,variants,and haplotypes in 2019nCoVR[J]. Genomics,Proteomics &Bioinformatics, 2020,18(6): 749-759.
|
[15] |
赵文明, 宋述慧, 陈梅丽 ,等. 2019新型冠状病毒信息库[J]. 遗传, 2020,42(2): 212-221.
|
|
ZHAO W M , SONG S H , CHEN M L ,et al. The 2019 novel coronavirus resource[J]. Hereditas(Beijing), 2020,42(2): 212-221.
|
[16] |
TIAN D M , WANG P , TANG B X ,et al. GWAS Atlas:a curated resource of genome-wide variant-trait associations in plants and animals[J]. Nucleic Acids Research, 2019,48(D1): 927-932.
|
[17] |
LI M W , ZOU D , LI Z H ,et al. EWAS Atlas:a curated knowledgebase of epigenomewide association studies[J]. Nucleic Acids Research, 2018,47(D1): 983-988.
|
[18] |
RIGDEN D J , FERNáNDEZ X M , . The 2021 Nucleic Acids Research database issue and the online molecular biology database collection[J]. Nucleic Acids Research, 2020,49(D1): 1-9.
|
[19] |
KARSCH-MIZRACHI I , NAKAMURA Y , COCHRANE G ,et al. The International Nucleotide Sequence Database Collaboration[J]. Nucleic Acids Research, 2012,40(D1): 33-37.
|
[20] |
ZHAO Z , ZHANG K N , WANG Q W ,et al. Chinese glioma genome atlas (CGGA):a comprehensive resource with functional genomic data from Chinese glioma patients[J]. Genomics,Proteomics &Bioinformatics, 2021,19(1): 1-12.
|
[21] |
BAO Z Y , YANG Z , HUANG Z ,et al. LncRNADisease 2.0:an updated database of long non-coding RNA-associated diseases[J]. Nucleic Acids Research, 2018,47(D1): 1034-1037.
|
[22] |
JIN J P , TIAN F , YANG D C ,et al. PlantTFDB 4.0:toward a central hub for transcription factors and regulatory interactions in plants[J]. Nucleic Acids Research, 2016,45(D1): 1040-1045.
|
[23] |
HU H , MIAO Y R , JIA L H ,et al. AnimalTFDB 3.0:a comprehensive resource for annotation and prediction of animal transcription factors[J]. Nucleic Acids Research, 2018,47(D1): 33-38.
|
[24] |
ZHANG X X , LAN Y J , XU J Y ,et al. CellMarker:a manually curated resource of cell markers in human and mouse[J]. Nucleic Acids Research, 2019,47(D1): 721-728.
|
[25] |
SAYERS E W , BOLTON E E , BRISTER J R ,et al. Database resources of the national center for biotechnology information[J]. Nucleic Acids Research, 2021.
|
[26] |
CANTELLI G , BATEMAN A , BROOKSBANK C ,et al. The European Bioinformatics Institute (EMBL-EBI) in 2021[J]. Nucleic Acids Research, 2021.
|
[27] |
ALTSCHUL S F , GISH W , MILLER W ,et al. Basic local alignment search tool[J]. Journal of Molecular Biology, 1990,215(3): 403-410.
|
[28] |
ALTSCHUL S F , MADDEN T L , SCH?FFER A A , ,et al. Gapped BLAST and PSI-BLAST:a new generation of protein database search programs[J]. Nucleic Acids Research, 1997,25(17): 3389-3402.
|
[29] |
MA L N , CAO J , LIU L ,et al. LncBook:a curated knowledgebase of human long non-coding RNAs[J]. Nucleic Acids Research, 2019,47(5): 2699.
|
[30] |
LIU Y M , WANG Z H , WU X Y ,et al. SorGSD:updating and expanding the sorghum genome science database with new contents and tools[J]. Biotechnology for Biofuels, 2021,14(1): 165.
|
[31] |
GONG Z , ZHU J W , LI C P ,et al. An online coronavirus analysis platform from the National Genomics Data Center[J]. Zoological Research, 2020,41(6): 705-708.
|
[32] |
Joint WHO-China Study Team . WHOconvened global study of origins of SARS-CoV-2:China part (text extract)[J]. Infectious Diseases & Immunity, 2021,1(3): 125-132.
|
[33] |
PANG X H , REN L L , WU S S ,et al. Cold-chain food contamination as the possible origin of COVID-19 resurgence in Beijing[J]. National Science Review, 2020,7(12): 1861-1864.
|
[34] |
SONG S H , LI C P , KANG L ,et al. Genomic epidemiology of SARS-CoV-2 in Pakistan[J]. Genomics,Proteomics &Bioinformatics, 2021.
|
[35] |
XIONG Y , LIU Y , CAO L ,et al. Transcriptomic characteristics of bronchoalveolar lavage fluid and peripheral blood mononuclear cells in COVID-19 patients[J]. Emerging Microbes& Infections, 2020,9(1): 761-770.
|
[36] |
YANG W Q , YANG Y B , ZHAO C C ,et al. Animal-ImputeDB:a comprehensive database with multiple animal reference panels for genotype imputation[J]. Nucleic Acids Research, 2019,48(D1): 659-667.
|